C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2610020H08 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084644 2610020H08Rik-201 ENSMUSG00000030924 10090 + 7:119794130-119848938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000084644
Transcript ID Ovary Testis
ENSMUST00000084644 0.829±0.17 5.645±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003N2 CIL_0003N2_0002 CGP 7:119768679-119848943
CIL_0003MY CIL_0003MY_0002 CGP 7:119794006-119896291

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0004527 IEA exonuclease activity
GO:0008150 ND biological_process
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261377 AC004381.6-001 protein_coding Homo_sapiens 0 682
ENST00000348433 AC004381.6-003 protein_coding Homo_sapiens 0 682
ENST00000561474 AC004381.6-020 protein_coding Homo_sapiens 1e-30 137
ENST00000563045 AC004381.6-018 retained_intron Homo_sapiens 0 294
ENST00000564200 AC004381.6-017 processed_transcript Homo_sapiens 0 654
ENST00000564274 AC004381.6-004 protein_coding Homo_sapiens 0 682
ENST00000565340 AC004381.6-011 protein_coding Homo_sapiens 0 488
ENST00000566276 AC004381.6-012 protein_coding Homo_sapiens 0 488
ENST00000566518 AC004381.6-015 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000566993 AC004381.6-002 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000568334 AC004381.6-019 retained_intron Homo_sapiens 0 195

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