C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acidic (leucine-rich) nuclear phosphoprotein 32 family, member A pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560832 ANP32AP1-002 ENSG00000259516 9606 + 15:35181799-35238197 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverLungOvaryPlacentaENST00000560832
Transcript ID Adipose Adrenal Breast Kidney Liver Lung Ovary Placenta
ENST00000560832 0.098±0.00 0.075±0.00 0.076±0.00 0.078±0.00 0.058±0.00 0.015±0.00 0.040±0.00 0.036±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0001 VISTA 15:34591431-35191947
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085519 Anp32a-001 protein_coding Mus_musculus 0 957
ENSMUST00000138226 Anp32a-003 processed_transcript Mus_musculus 0 704
ENSMUST00000135395 Anp32a-004 protein_coding Mus_musculus 0 676
ENSMUST00000145679 Anp32a-010 retained_intron Mus_musculus 0 473
ENSDART00000114041 anp32a-201 protein_coding Danio_rerio 0 326
ENSDART00000008785 anp32a-001 protein_coding Danio_rerio 0 326
ENSDART00000146420 anp32a-002 protein_coding Danio_rerio 0 324
ENSDART00000143514 anp32a-003 processed_transcript Danio_rerio 0 302

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