C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acidic (leucine-rich) nuclear phosphoprotein 32 family, member A pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559548 ANP32AP1-001 ENSG00000259516 9606 + 15:35237326-35238062 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartLiverTestisENST00000559548
Transcript ID Bladder Brain Colon Heart Liver Testis
ENST00000559548 0.058±0.00 0.069±0.00 0.063±0.00 0.063±0.00 0.021±0.00 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0001 VISTA 15:34591431-35191947
CIL_0008IU CIL_0008IU_0001 VISTA 15:34953121-35554645
CIL_0006HH CIL_0006HH_0001 CGP 15:34978341-35546193

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085519 Anp32a-001 protein_coding Mus_musculus 0 686
ENSDART00000114041 anp32a-201 protein_coding Danio_rerio 0 326
ENSDART00000008785 anp32a-001 protein_coding Danio_rerio 0 326
ENSDART00000146420 anp32a-002 protein_coding Danio_rerio 0 324
ENSDART00000143514 anp32a-003 processed_transcript Danio_rerio 0 302

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