C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36, pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085720 Rpl36-ps3-201 ENSMUSG00000066629 10090 + 12:12911986-12912369 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085720
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085720 0.664±0.27 0.263±0.15 8.843±3.02 4.060±2.90 0.895±0.10 0.477±0.20 0.604±0.23 0.457±0.37 7.382±9.34 0.553±0.11 0.384±0.18 1.691±1.39 1.380±0.91 4.775±1.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306634 RP11-220D10.1-001 processed_pseudogene Homo_sapiens 0 311
ENST00000347512 RPL36-003 protein_coding Homo_sapiens 0 388
ENST00000394580 RPL36-004 protein_coding Homo_sapiens 0 374
ENST00000407266 RP3-340B19.5-001 processed_pseudogene Homo_sapiens 0 204
ENST00000423857 CTA-85E5.7-001 processed_pseudogene Homo_sapiens 0 228
ENST00000426026 RPL36P2-001 processed_pseudogene Homo_sapiens 0 254
ENST00000442164 RP11-4M23.7-001 processed_pseudogene Homo_sapiens 0 226
ENST00000449443 RP11-95P9.1-001 processed_pseudogene Homo_sapiens 0 276
ENST00000477971 RP11-630D6.1-001 processed_pseudogene Homo_sapiens 0 257
ENST00000488095 RP1-146I3.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000577222 RPL36-001 protein_coding Homo_sapiens 0 388
ENST00000579446 RPL36-007 protein_coding Homo_sapiens 0 272
ENST00000579649 RPL36-006 protein_coding Homo_sapiens 0 374
ENST00000582463 RPL36-005 protein_coding Homo_sapiens 6e-29 130
ENST00000590786 RPL36-008 retained_intron Homo_sapiens 9e-28 128

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