C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglycerate kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491291 PGK1-004 ENSG00000102144 9606 + X:78065216-78122903 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000491291
Transcript ID Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000491291 76.966±0.00 9.114±0.00 38.515±24.74 78.128±65.96 12.209±0.00 10.805±0.00 35.767±0.00 43.603±21.95 68.509±0.00 7.129±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YZ CIL_0001YZ_0001 CGP X:78065188-78139706

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091117 Gm5537-201 processed_pseudogene Mus_musculus 0 941
ENSMUST00000135949 Pgk1-003 nonsense_mediated_decay Mus_musculus 0 941
ENSMUST00000081593 Pgk1-001 protein_coding Mus_musculus 0 941
ENSMUST00000085735 Pgk1-rs7-201 protein_coding Mus_musculus 0 941
ENSMUST00000133559 Pgk1-002 retained_intron Mus_musculus 0 538

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