C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor kinase-interactor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086564 Git2-005 ENSMUSG00000041890 10090 - 5:114729575-114773462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086564
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086564 9.099±1.37 3.826±0.00 5.852±0.08 6.436±3.04 9.537±2.15 4.355±0.85 4.961±0.62 5.717±0.66 4.275±3.39 13.057±3.52 1.520±0.25 8.992±2.99 27.098±7.31 2.279±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GG CIL_0001GG_0003 CGP 5:114707760-114775517
CIL_0001GH CIL_0001GH_0003 CGP 5:114727407-114806200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity
GO:0048266 IMP behavioral response to pain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320063 GIT2-007 protein_coding Homo_sapiens 0 1544
ENST00000354574 GIT2-201 protein_coding Homo_sapiens 0 1554
ENST00000355312 GIT2-001 protein_coding Homo_sapiens 0 2704
ENST00000361006 GIT2-004 protein_coding Homo_sapiens 0 2050
ENST00000457474 GIT2-010 protein_coding Homo_sapiens 0 1517
ENST00000546613 GIT2-017 processed_transcript Homo_sapiens 0 335
ENST00000547267 GIT2-014 retained_intron Homo_sapiens 0 566
ENST00000547815 GIT2-006 protein_coding Homo_sapiens 0 1794
ENST00000548000 GIT2-018 processed_transcript Homo_sapiens 0 390
ENST00000548643 GIT2-012 retained_intron Homo_sapiens 0 839
ENST00000548655 GIT2-019 processed_transcript Homo_sapiens 0 287
ENST00000549524 TCHP-010 retained_intron Homo_sapiens 0.000000000001 81
ENST00000549999 GIT2-009 retained_intron Homo_sapiens 0 390
ENST00000550186 GIT2-005 protein_coding Homo_sapiens 0 1790
ENST00000551209 GIT2-011 protein_coding Homo_sapiens 0 1515
ENST00000551455 GIT2-002 retained_intron Homo_sapiens 0 1831
ENST00000551721 GIT2-015 retained_intron Homo_sapiens 0 309
ENST00000552978 GIT2-023 retained_intron Homo_sapiens 0 401
ENST00000553118 GIT2-008 protein_coding Homo_sapiens 0 1749

Loading