C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor kinase interacting ArfGAP 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000354574 GIT2-201 ENSG00000139436 9606 - 12:109929802-109996389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverOvaryPlacentaENST00000354574
Transcript ID Breast Colon Heart Kidney Liver Ovary Placenta
ENST00000354574 3.097±0.00 1.176±0.00 2.501±0.00 2.105±0.00 1.105±0.00 2.843±0.00 1.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JH CIL_0001JH_0002 CGP 12:109850943-109983841
CIL_0001GG CIL_0001GG_0002 CGP 12:109900264-109996389
CIL_0001GH CIL_0001GH_0002 CGP 12:109929792-110039763

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008060 IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178440 Git2-201 protein_coding Mus_musculus 0 2348
ENSMUST00000043283 Git2-002 protein_coding Mus_musculus 0 2338
ENSMUST00000112183 Git2-004 protein_coding Mus_musculus 0 2324
ENSMUST00000112185 Git2-001 protein_coding Mus_musculus 0 1792
ENSMUST00000086564 Git2-005 protein_coding Mus_musculus 0 1554
ENSMUST00000153756 Git2-014 retained_intron Mus_musculus 0 1415
ENSMUST00000155908 Git2-006 protein_coding Mus_musculus 0 1395
ENSMUST00000131993 Git2-010 protein_coding Mus_musculus 0 942
ENSMUST00000146044 Git2-007 protein_coding Mus_musculus 0 782
ENSMUST00000131016 Git2-009 protein_coding Mus_musculus 0 717
ENSMUST00000133096 Git2-003 retained_intron Mus_musculus 0 551
ENSMUST00000144191 Git2-011 processed_transcript Mus_musculus 0 327
ENSMUST00000131582 Git2-008 processed_transcript Mus_musculus 0 298
ENSMUST00000100812 Git1-004 protein_coding Mus_musculus 9e-30 137
ENSMUST00000037285 Git1-001 protein_coding Mus_musculus 9e-30 137

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