C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bicaudal D homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395758 BICD1-003 ENSG00000151746 9606 + 12:32107252-32377923 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyMuscleOvaryPlacentaENST00000395758
Transcript ID Adipose Kidney Muscle Ovary Placenta
ENST00000395758 0.299±0.00 0.560±0.00 0.355±0.00 1.822±0.00 2.883±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017G CIL_00017G_0001 CGP 12:31959370-32383633
CIL_0003DJ CIL_0003DJ_0002 CGP 12:32106835-32646050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006810 IEA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173408 Bicd1-007 nonsense_mediated_decay Mus_musculus 0 3670
ENSMUST00000086829 Bicd1-001 protein_coding Mus_musculus 0 3144
ENSMUST00000111513 Bicd1-003 protein_coding Mus_musculus 0 3142
ENSMUST00000003544 Bicd1-002 protein_coding Mus_musculus 0 3136
ENSMUST00000130270 Bicd1-004 retained_intron Mus_musculus 0 725
ENSMUST00000174886 Bicd1-006 retained_intron Mus_musculus 0 634
ENSMUST00000172926 Bicd1-008 protein_coding Mus_musculus 0 545
ENSMUST00000140759 Bicd1-005 retained_intron Mus_musculus 0 339

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