C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087582 Hnrnpm-002 ENSMUSG00000059208 10090 - 17:33646239-33685388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087582
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087582 37.554±9.90 84.944±4.35 35.631±0.39 76.851±8.12 63.292±25.02 67.765±3.98 22.624±4.31 29.547±9.64 69.113±57.04 46.631±18.07 27.617±1.74 109.627±42.36 90.293±61.04 67.510±53.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325495 HNRNPM-002 protein_coding Homo_sapiens 0 2676
ENST00000348943 HNRNPM-001 protein_coding Homo_sapiens 0 3435
ENST00000560685 HNRNPMP1-001 processed_pseudogene Homo_sapiens 0 226
ENST00000593293 HNRNPM-014 retained_intron Homo_sapiens 0 326
ENST00000594907 HNRNPM-017 protein_coding Homo_sapiens 0 760
ENST00000596295 HNRNPM-012 protein_coding Homo_sapiens 0 787
ENST00000596369 HNRNPMP2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000596984 HNRNPM-010 protein_coding Homo_sapiens 0 597
ENST00000597081 HNRNPM-016 processed_transcript Homo_sapiens 0 1234
ENST00000597270 HNRNPM-007 protein_coding Homo_sapiens 0 896
ENST00000597813 HNRNPM-013 retained_intron Homo_sapiens 0 442
ENST00000598367 HNRNPM-008 protein_coding Homo_sapiens 0 318
ENST00000598603 HNRNPM-011 retained_intron Homo_sapiens 0 243
ENST00000598999 HNRNPM-015 protein_coding Homo_sapiens 0 390
ENST00000600092 HNRNPM-003 protein_coding Homo_sapiens 0 1339
ENST00000600806 HNRNPM-004 nonsense_mediated_decay Homo_sapiens 0 2032
ENST00000601645 HNRNPM-009 protein_coding Homo_sapiens 0 760
ENST00000602219 HNRNPM-006 processed_transcript Homo_sapiens 0 695
ENST00000620401 HNRNPM-201 protein_coding Homo_sapiens 0 2676
ENST00000621170 CTB-147N14.7-001 processed_pseudogene Homo_sapiens 0 363

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