C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10232
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089221 Gm10232-001 ENSMUSG00000068141 10090 - 17:3044014-3044733 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000089221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000089221 1.329±0.20 0.507±0.29 2.900±0.62 3.565±0.19 0.882±0.23 1.132±0.36 0.475±0.11 1.171±0.30 4.114±3.27 0.863±0.45 0.252±0.16 1.795±0.89 1.568±1.03 0.763±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000291552 U2AF1-001 protein_coding Homo_sapiens 0 933
ENST00000380276 U2AF1-002 protein_coding Homo_sapiens 0 811
ENST00000398137 U2AF1-201 protein_coding Homo_sapiens 0 734
ENST00000459639 U2AF1-004 protein_coding Homo_sapiens 0 876
ENST00000463599 U2AF1-009 retained_intron Homo_sapiens 8.96831e-44 180
ENST00000464750 U2AF1-003 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000468039 U2AF1-011 retained_intron Homo_sapiens 4e-25 119
ENST00000471250 U2AF1-008 retained_intron Homo_sapiens 0 433
ENST00000475639 U2AF1-005 retained_intron Homo_sapiens 0 739
ENST00000478282 U2AF1-007 retained_intron Homo_sapiens 0 287
ENST00000486519 U2AF1-010 processed_transcript Homo_sapiens 0 614
ENST00000496462 U2AF1-006 retained_intron Homo_sapiens 0 209
ENST00000594613 RP11-323I15.2-001 processed_pseudogene Homo_sapiens 0 673
ENST00000610664 U2AF1-003 protein_coding Homo_sapiens 0 933
ENST00000619610 U2AF1-002 protein_coding Homo_sapiens 0 811
ENST00000620065 U2AF1-001 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000623375 U2AF1-005 protein_coding Homo_sapiens 0 876
ENST00000624739 U2AF1-004 retained_intron Homo_sapiens 0 739

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