C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623375 U2AF1-005 ENSG00000275895 9606 - 21:6484623-6496930 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyENST00000623375
Transcript ID Adrenal Brain Kidney
ENST00000623375 0.032±0.00 0.008±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MQ CIL_0000MQ_0003 CGP 21:6444869-6499261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000014684 U2af1-201 protein_coding Mus_musculus 0 977
ENSMUST00000089221 Gm10232-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000166526 U2af1-202 protein_coding Mus_musculus 0 856

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