C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496462 U2AF1-006 ENSG00000160201 9606 - 21:43097622-43107524 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000496462
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000496462 0.730±0.00 2.299±0.00 0.752±0.00 0.878±0.52 0.956±0.00 0.771±0.48 0.499±0.00 0.552±0.07 0.253±0.00 1.257±0.04 0.105±0.00 1.583±0.48 0.271±0.11 0.670±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MQ CIL_0000MQ_0002 CGP 21:43053191-43107587
CIL_0000P2 CIL_0000P2_0001 CGP 21:43092956-43172805

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166526 U2af1-202 protein_coding Mus_musculus 0 326
ENSMUST00000089221 Gm10232-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000014684 U2af1-201 protein_coding Mus_musculus 0 207

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