C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478282 U2AF1-007 ENSG00000160201 9606 - 21:43092956-43096390 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000478282
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000478282 0.797±0.00 5.324±0.00 0.752±0.66 1.246±0.29 0.332±0.04 0.417±0.00 1.207±0.00 0.438±0.05 1.748±0.60 0.149±0.00 3.803±2.83 0.638±0.25 1.753±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MQ CIL_0000MQ_0002 CGP 21:43053191-43107587
CIL_0000P2 CIL_0000P2_0001 CGP 21:43092956-43172805

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089221 Gm10232-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000014684 U2af1-201 protein_coding Mus_musculus 0 287
ENSMUST00000166526 U2af1-202 protein_coding Mus_musculus 0 287

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