C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mutated in colorectal cancers
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000089874 Mcc-201 ENSMUSG00000071856 10090 - 18:44425061-44812182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000089874
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000089874 1.818±0.00 1.299±0.50 0.727±0.37 1.209±0.86 3.304±0.52 1.068±0.00 5.415±0.78 2.629±0.68 0.153±0.00 0.243±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UM CIL_0004UM_0002 CGP 18:44380500-44812182

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0010633 IEA negative regulation of epithelial cell migration
GO:0050680 IEA negative regulation of epithelial cell proliferation
GO:0090090 IEA negative regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302475 MCC-001 protein_coding Homo_sapiens 0 2957
ENST00000408903 MCC-003 protein_coding Homo_sapiens 0 3572
ENST00000502648 MCC-004 retained_intron Homo_sapiens 0 606
ENST00000506605 MCC-007 processed_transcript Homo_sapiens 0 902
ENST00000511242 MCC-010 processed_transcript Homo_sapiens 5e-29 135
ENST00000511847 MCC-006 processed_transcript Homo_sapiens 0 902
ENST00000514701 MCC-009 protein_coding Homo_sapiens 0 2523
ENST00000515367 MCC-011 protein_coding Homo_sapiens 0 2957
ENST00000624689 MCC-012 protein_coding Homo_sapiens 0 652

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