C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mutated in colorectal cancers
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515367 MCC-011 ENSG00000171444 9606 - 5:113026132-113234677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverMuscleOvaryENST00000515367
Transcript ID Bladder Brain Kidney Liver Muscle Ovary
ENST00000515367 0.649±0.00 0.429±0.00 1.293±0.00 2.152±0.00 1.061±0.00 3.129±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UM CIL_0004UM_0001 CGP 5:112976702-113488830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164666 Mcc-202 protein_coding Mus_musculus 0 2959
ENSMUST00000089874 Mcc-201 protein_coding Mus_musculus 0 2957
ENSDART00000128214 MCC-201 protein_coding Danio_rerio 0 1125

Loading