C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat and coiled-coil domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091325 Lrrcc1-002 ENSMUSG00000027550 10090 + 3:14533824-14566103 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000091325
Transcript ID Adipose Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000091325 0.477±0.00 2.719±0.00 0.500±0.02 0.235±0.00 0.568±0.38 0.559±0.00 1.088±0.80 2.066±0.95 26.455±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0002 CGP 3:14533788-14606308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360375 LRRCC1-001 protein_coding Homo_sapiens 0 2163
ENST00000414626 LRRCC1-006 protein_coding Homo_sapiens 0 2163
ENST00000517875 LRRCC1-002 nonsense_mediated_decay Homo_sapiens 0 1476
ENST00000522567 LRRCC1-005 nonsense_mediated_decay Homo_sapiens 0 1519
ENST00000522770 LRRCC1-003 nonsense_mediated_decay Homo_sapiens 0 1517

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