C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091701 Hist1h3a-001 ENSMUSG00000069265 10090 - 13:23761853-23762386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000091701
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000091701 1.485±1.22 0.962±0.43 0.347±0.19 11.261±3.64 2.610±1.68 3.518±0.74 0.146±0.07 0.351±0.24 13.761±17.13 0.691±0.21 6.729±2.33 4.464±4.39 9.061±4.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 459
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 455
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 444
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 444
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 433
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 433
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 433
ENSDART00000136456 protein_coding Danio_rerio 0 427
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 422
ENSDART00000089844 protein_coding Danio_rerio 0 416
ENSDART00000151600 protein_coding Danio_rerio 0 359
ENSDART00000093030 protein_coding Danio_rerio 0 350
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 494
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 481
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 475
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 457
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 438

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