C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(rC) binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092393 Pcbp3-007 ENSMUSG00000001120 10090 - 10:76763305-76816706 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleENSMUST00000092393
Transcript ID Liver Muscle
ENSMUST00000092393 0.079±0.01 0.356±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000048893 pcbp3-201 protein_coding Danio_rerio 0 688
ENSDART00000134431 pcbp3-003 protein_coding Danio_rerio 0 640
ENSDART00000148317 pcbp3-004 protein_coding Danio_rerio 0 640
ENSDART00000015267 pcbp3-001 protein_coding Danio_rerio 0 640
ENSDART00000025885 pcbp2-001 protein_coding Danio_rerio 0 427
ENSDART00000144448 pcbp3-005 nonsense_mediated_decay Danio_rerio 0 401
ENSDART00000131317 pcbp2-004 protein_coding Danio_rerio 0 294
ENST00000400304 PCBP3-003 protein_coding Homo_sapiens 0 828
ENST00000400305 PCBP3-009 protein_coding Homo_sapiens 0 693
ENST00000400308 PCBP3-005 protein_coding Homo_sapiens 0 784
ENST00000400309 PCBP3-004 protein_coding Homo_sapiens 0 983
ENST00000400310 PCBP3-002 protein_coding Homo_sapiens 0 983
ENST00000400314 PCBP3-001 protein_coding Homo_sapiens 0 983
ENST00000449640 PCBP3-201 protein_coding Homo_sapiens 0 924
ENST00000468429 PCBP3-010 processed_transcript Homo_sapiens 0 688
ENST00000475402 PCBP3-011 processed_transcript Homo_sapiens 0 292
ENST00000498121 PCBP3-008 retained_intron Homo_sapiens 0 436

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