C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(rC) binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400305 PCBP3-009 ENSG00000183570 9606 + 21:45896270-45942454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyOvaryPlacentaTestisENST00000400305
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000400305 0.753±0.00 2.676±0.00 1.845±0.00 1.919±0.00 1.733±0.00 1.004±0.55 0.080±0.00 0.689±0.30 5.295±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168465 Pcbp3-201 protein_coding Mus_musculus 0 712
ENSMUST00000001148 Pcbp3-002 protein_coding Mus_musculus 0 712
ENSMUST00000092393 Pcbp3-007 nonsense_mediated_decay Mus_musculus 0 693
ENSMUST00000105411 Pcbp3-001 protein_coding Mus_musculus 0 693
ENSMUST00000168505 Pcbp3-003 processed_transcript Mus_musculus 0 693
ENSDART00000048893 pcbp3-201 protein_coding Danio_rerio 0 521
ENSDART00000134431 pcbp3-003 protein_coding Danio_rerio 0 521
ENSDART00000148317 pcbp3-004 protein_coding Danio_rerio 0 521
ENSDART00000015267 pcbp3-001 protein_coding Danio_rerio 0 521
ENSMUST00000168240 Pcbp3-005 processed_transcript Mus_musculus 0 501
ENSMUST00000171437 Pcbp3-004 processed_transcript Mus_musculus 0 424
ENSMUST00000173854 Pcbp3-008 protein_coding Mus_musculus 0 398
ENSDART00000144448 pcbp3-005 nonsense_mediated_decay Danio_rerio 0 276
ENSMUST00000165571 Pcbp3-006 processed_transcript Mus_musculus 0 268

Loading