C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centrosomal protein 250kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397527 CEP250-001 ENSG00000126001 9606 + 20:35455329-35519280 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000397527
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000397527 0.457±0.00 0.317±0.14 0.120±0.00 0.209±0.00 0.569±0.00 0.397±0.15 1.488±0.78 0.157±0.00 3.243±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0001 VISTA 20:35018152-35620688
CIL_0002I5 CIL_0002I5_0001 CGP 20:35433347-35519280
CIL_0005FS CIL_0005FS_0001 CGP 20:35455164-35529652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 IDA mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005814 IDA centriole
GO:0005815 NAS microtubule organizing center
GO:0005829 TAS cytosol
GO:0005929 IEA cilium
GO:0008022 IPI protein C-terminus binding
GO:0008104 IMP protein localization
GO:0010457 IMP centriole-centriole cohesion
GO:0019901 IPI protein kinase binding
GO:0019904 IPI protein domain specific binding
GO:0030997 IDA regulation of centriole-centriole cohesion
GO:0031616 IEA spindle pole centrosome
GO:0033365 IMP protein localization to organelle
GO:0043234 IMP protein complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094421 Cep250-202 protein_coding Mus_musculus 0 5600
ENSMUST00000039994 Cep250-201 protein_coding Mus_musculus 0 4261
ENSMUST00000109619 Cep250-001 protein_coding Mus_musculus 0 4261
ENSMUST00000149905 Cep250-004 retained_intron Mus_musculus 0 2015
ENSMUST00000148191 Cep250-005 retained_intron Mus_musculus 0 1973
ENSMUST00000151569 Cep250-009 protein_coding Mus_musculus 0 1423
ENSMUST00000109618 Cep250-003 protein_coding Mus_musculus 0 1059
ENSMUST00000155160 Cep250-006 retained_intron Mus_musculus 0 230
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000003 71

Loading