C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synapse differentiation inducing 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554823 SYNDIG1L-001 ENSG00000183379 9606 - 14:74405894-74409806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000554823
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000554823 0.043±0.00 0.030±0.00 0.168±0.00 1.536±0.90 0.130±0.00 0.348±0.00 0.018±0.00 0.071±0.00 0.050±0.00 0.349±0.00 0.032±0.00 0.150±0.05 0.082±0.03 0.351±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KJ CIL_0004KJ_0002 CGP 14:74303069-74426102
CIL_0005BB CIL_0005BB_0001 CGP 14:74405893-74494177

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009607 IEA response to biotic stimulus
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095550 Syndig1l-201 protein_coding Mus_musculus 0 809
ENSMUST00000109934 Syndig1-003 protein_coding Mus_musculus 2e-38 165
ENSMUST00000109935 Syndig1-001 protein_coding Mus_musculus 2e-38 165

Loading