C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, delta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510992 GRID2-002 ENSG00000152208 9606 + 4:92304657-93772498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungPlacentaTestisENST00000510992
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Placenta Testis
ENST00000510992 0.719±0.34 0.030±0.00 0.027±0.00 0.039±0.00 0.029±0.00 0.214±0.00 0.135±0.00 0.036±0.02 1.472±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001RV CIL_0001RV_0002 CGP 4:90127535-93774556
CIL_0005BW CIL_0005BW_0002 CGP 4:92304399-93830964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IBA:IEA ionotropic glutamate receptor activity
GO:0005234 IBA:IEA extracellular-glutamate-gated ion channel activity
GO:0005886 ISS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007215 TAS glutamate receptor signaling pathway
GO:0008066 TAS glutamate receptor activity
GO:0008328 ISS ionotropic glutamate receptor complex
GO:0016020 IEA membrane
GO:0021707 ISS cerebellar granule cell differentiation
GO:0030054 IEA cell junction
GO:0030165 ISS PDZ domain binding
GO:0030425 IBA dendrite
GO:0034220 IBA ion transmembrane transport
GO:0034613 ISS cellular protein localization
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 ISS synaptic transmission, glutamatergic
GO:0043197 ISS dendritic spine
GO:0043523 ISS regulation of neuron apoptotic process
GO:0045202 ISS synapse
GO:0045211 IBA postsynaptic membrane
GO:0060079 ISS regulation of excitatory postsynaptic membrane potential
GO:0060134 ISS prepulse inhibition
GO:0097110 ISS scaffold protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095852 Grid2-001 protein_coding Mus_musculus 0 3230
ENSMUST00000161105 Grid2-005 retained_intron Mus_musculus 0 1068
ENSMUST00000159561 Grid2-002 protein_coding Mus_musculus 0 948
ENSMUST00000162968 Grid2-006 retained_intron Mus_musculus 0 370
ENSMUST00000160408 Grid2-004 retained_intron Mus_musculus 0 324

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