C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5301
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096092 Gm5301-201 ENSMUSG00000096702 10090 - 6:23165338-23167413 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000096092
Transcript ID Brain Testis
ENSMUST00000096092 0.001±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083M CIL_00083M_0002 VISTA 6:22971299-23575344
CIL_0003QN CIL_0003QN_0002 CGP 6:23072173-23248264

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377327 CRNKL1-001 protein_coding Homo_sapiens 0 2008
ENST00000377340 CRNKL1-002 protein_coding Homo_sapiens 0 2008
ENST00000490910 CRNKL1-003 nonsense_mediated_decay Homo_sapiens 0 1982
ENST00000496549 CRNKL1-004 nonsense_mediated_decay Homo_sapiens 0 1978
ENST00000536226 CRNKL1-007 protein_coding Homo_sapiens 0 2008

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