C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | vacuolar protein sorting 8 homolog (S. cerevisiae) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000096191  |
Vps8-002 |
ENSMUSG00000033653 |
10090 | + |
16:21423118-21579247  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003YA | CIL_0003YA_0003 | CGP | 16:21423118-21694665 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000287546
|
VPS8-201 | protein_coding | Homo_sapiens | 0 | 4137 |
|
ENST00000422105
|
VPS8-010 | protein_coding | Homo_sapiens | 0 | 630 |
|
ENST00000424463
|
VPS8-004 | protein_coding | Homo_sapiens | 0 | 483 |
|
ENST00000426319
|
VPS8-005 | protein_coding | Homo_sapiens | 0.00000002 | 62 |
|
ENST00000436792
|
VPS8-002 | protein_coding | Homo_sapiens | 0 | 4165 |
|
ENST00000446204
|
VPS8-003 | protein_coding | Homo_sapiens | 0 | 1934 |
|
ENST00000452140
|
VPS8-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 200 |
|
ENST00000452666
|
VPS8-013 | nonsense_mediated_decay | Homo_sapiens | 0 | 363 |
|
ENST00000458721
|
VPS8-020 | nonsense_mediated_decay | Homo_sapiens | 0 | 584 |
|
ENST00000463687
|
VPS8-022 | processed_transcript | Homo_sapiens | 0 | 608 |
|
ENST00000465818
|
VPS8-016 | retained_intron | Homo_sapiens | 0 | 671 |
|
ENST00000469479
|
VPS8-014 | retained_intron | Homo_sapiens | 0 | 486 |
|
ENST00000469713
|
VPS8-017 | retained_intron | Homo_sapiens | 0 | 268 |
|
ENST00000488255
|
VPS8-023 | retained_intron | Homo_sapiens | 0 | 442 |
|
ENST00000492449
|
VPS8-006 | retained_intron | Homo_sapiens | 0 | 2239 |
