C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10557
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097690 Gm10557-201 ENSMUSG00000073647 10090 - 18:4198216-4198969 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097690
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097690 2.312±0.32 0.397±0.12 3.982±1.60 4.690±4.03 1.920±0.97 1.097±0.47 1.133±0.29 1.043±0.45 1.875±1.57 3.202±0.64 0.656±0.07 2.206±1.03 4.697±4.58 1.481±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268603 CDH11-001 protein_coding Homo_sapiens 0 682
ENST00000299345 CDH8-013 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000394156 CDH11-002 protein_coding Homo_sapiens 0 682
ENST00000566827 CDH11-004 protein_coding Homo_sapiens 0 682
ENST00000567934 CDH11-003 protein_coding Homo_sapiens 0 484
ENST00000569128 CDH11-012 retained_intron Homo_sapiens 0 394
ENST00000577390 CDH8-001 protein_coding Homo_sapiens 4.00001e-41 176
ENST00000577730 CDH8-012 protein_coding Homo_sapiens 3.00004e-41 176
ENST00000583382 CDH8-011 protein_coding Homo_sapiens 6.00036e-42 176
ENST00000584337 CDH8-003 protein_coding Homo_sapiens 9.99967e-42 176
ENST00000585315 CDH8-014 nonsense_mediated_decay Homo_sapiens 3.00004e-41 176

Loading