C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 6 (alpha-1,3,-glucosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097961 Alg6-001 ENSMUSG00000073792 10090 + 4:99715665-99763460 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000097961
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000097961 0.932±0.56 1.114±0.54 2.125±1.29 3.402±0.00 0.901±0.26 1.990±0.26 0.557±0.20 0.921±0.27 2.990±2.37 0.773±0.18 1.213±0.45 2.219±2.22 0.604±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KW CIL_0007KW_0002 UCNEbase 4:99267882-99771733
CIL_0008AH CIL_0008AH_0002 VISTA 4:99273882-99874766
CIL_0002G4 CIL_0002G4_0002 CGP 4:99656299-99763460
CIL_0002G7 CIL_0002G7_0002 CGP 4:99715664-99929813

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006487 IEA protein N-linked glycosylation
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0046527 IEA glucosyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263440 ALG6-006 protein_coding Homo_sapiens 0 1581
ENST00000371108 ALG6-001 protein_coding Homo_sapiens 0 1609
ENST00000487136 ALG6-002 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000603108 ALG6-007 nonsense_mediated_decay Homo_sapiens 0 929

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