C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ALG6, alpha-1,3-glucosyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371108 ALG6-001 ENSG00000088035 9606 + 1:63367590-63438562 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000371108
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000371108 0.218±0.00 0.323±0.00 0.345±0.00 0.165±0.00 0.145±0.00 0.318±0.26 0.124±0.00 0.217±0.00 0.700±0.00 0.477±0.09 0.403±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KW CIL_0007KW_0001 UCNEbase 1:62876629-63449336
CIL_0008AH CIL_0008AH_0001 VISTA 1:62899548-63500451
CIL_0002G4 CIL_0002G4_0001 CGP 1:63323041-63438562
CIL_0002G7 CIL_0002G7_0001 CGP 1:63367590-63593721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005789 TAS:IEA endoplasmic reticulum membrane
GO:0006487 IGI protein N-linked glycosylation
GO:0006488 TAS dolichol-linked oligosaccharide biosynthetic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046527 IDA glucosyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097961 Alg6-001 protein_coding Mus_musculus 0 1609
ENSMUST00000144805 Alg6-007 retained_intron Mus_musculus 0 1210
ENSMUST00000124147 Alg6-003 retained_intron Mus_musculus 0 398
ENSMUST00000137473 Alg6-002 retained_intron Mus_musculus 5e-36 158
ENSMUST00000107004 Alg6-004 protein_coding Mus_musculus 2e-34 152
ENSMUST00000141870 Alg6-005 processed_transcript Mus_musculus 2e-34 152
ENSMUST00000139799 Alg6-006 protein_coding Mus_musculus 8e-34 150

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