C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone cluster 2, H3b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098843 Hist2h3b-001 ENSMUSG00000074403 10090 + 3:96268654-96269141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098843
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098843 2.616±2.19 2.508±0.63 0.247±0.10 21.628±4.08 8.084±6.14 9.034±4.02 0.668±0.24 1.471±0.68 14.863±31.07 5.181±0.70 0.314±0.00 14.099±4.71 7.968±0.96 0.757±0.15

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005654 ISS nucleoplasm
GO:0046982 IEA protein heterodimerization activity
GO:0060968 ISS regulation of gene silencing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 488
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 455
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 455
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 449
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 444
ENSDART00000136456 protein_coding Danio_rerio 0 444
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 438
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 438
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 438
ENSDART00000089844 protein_coding Danio_rerio 0 422
ENST00000331491 HIST2H3D-001 protein_coding Homo_sapiens 0 610
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 477
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 514
ENST00000369158 HIST2H3C-001 protein_coding Homo_sapiens 0 614
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 468
ENST00000392948 HIST2H3PS2-001 protein_coding Homo_sapiens 0 584
ENST00000401004 HIST2H3DP1-001 unprocessed_pseudogene Homo_sapiens 0 553
ENST00000403683 HIST2H3A-001 protein_coding Homo_sapiens 0 614

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