C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: La ribonucleoprotein domain family, member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099121 Larp1b-203 ENSMUSG00000025762 10090 + 3:41024373-41039236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099121
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099121 0.553±0.24 0.449±0.24 0.773±0.12 0.520±0.24 0.790±0.16 0.245±0.01 0.847±0.20 0.278±0.08 0.161±0.00 0.370±0.06 0.765±0.20 0.116±0.05 9.331±2.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0002 VISTA 3:40857758-41459600
CIL_0006YL CIL_0006YL_0003 CGP 3:41021939-41083046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326639 LARP1B-001 protein_coding Homo_sapiens 0 828
ENST00000503725 LARP1B-008 processed_transcript Homo_sapiens 0 883
ENST00000506199 LARP1B-010 processed_transcript Homo_sapiens 0 832
ENST00000507259 LARP1B-007 nonsense_mediated_decay Homo_sapiens 0 752
ENST00000508648 LARP1B-009 processed_transcript Homo_sapiens 0 523

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