C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATPase type 13A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256031 ATP13A3-201 ENSG00000133657 9606 - 3:194402680-194468239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastOvaryPlacentaENST00000256031
Transcript ID Bladder Breast Ovary Placenta
ENST00000256031 4.507±0.00 2.072±0.00 0.827±0.00 0.927±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A1 CIL_0009A1_0001 VISTA 3:193911571-194513668
CIL_0000NC CIL_0000NC_0001 CGP 3:194394821-194498364
CIL_0000NB CIL_0000NB_0001 CGP 3:194402672-194633689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006812 IEA cation transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016887 IEA ATPase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061350 Atp13a3-001 protein_coding Mus_musculus 0 4346
ENSMUST00000100013 Atp13a3-201 protein_coding Mus_musculus 0 4126
ENSMUST00000149882 Atp13a3-005 retained_intron Mus_musculus 0 351

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