C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | phosphatidylglycerophosphate synthase 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000100185  |
Pgs1-003 |
ENSMUSG00000017715 |
10090 | + |
11:118000795-118023925  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007YS | CIL_0007YS_0002 | VISTA | 11:117565410-118167678 |
| CIL_0003UD | CIL_0003UD_0003 | CGP | 11:117966079-118024011 |
| CIL_00062Y | CIL_00062Y_0002 | CGP | 11:117986292-118129219 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005739 | IDA | mitochondrion |
| GO:0008150 | ND | biological_process |
| GO:0008654 | IEA | phospholipid biosynthetic process |
| GO:0016780 | IEA | phosphotransferase activity, for other substituted phosphate groups |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000262764
|
PGS1-001 | protein_coding | Homo_sapiens | 0 | 1146 |
|
ENST00000585521
|
PGS1-009 | processed_transcript | Homo_sapiens | 0 | 315 |
|
ENST00000586019
|
PGS1-010 | protein_coding | Homo_sapiens | 0 | 333 |
|
ENST00000586355
|
PGS1-011 | protein_coding | Homo_sapiens | 0 | 418 |
|
ENST00000588169
|
PGS1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 1146 |
|
ENST00000588281
|
PGS1-007 | processed_transcript | Homo_sapiens | 0 | 1038 |
|
ENST00000589425
|
PGS1-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 732 |
|
ENST00000589426
|
PGS1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 1520 |
|
ENST00000589689
|
PGS1-003 | protein_coding | Homo_sapiens | 0 | 924 |
|
ENST00000591996
|
PGS1-008 | retained_intron | Homo_sapiens | 0 | 614 |
|
ENST00000592043
|
PGS1-006 | protein_coding | Homo_sapiens | 0 | 669 |
