C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: diphthamine biosynthesis 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102542 Dph6-001 ENSMUSG00000057147 10090 - 2:114516420-114654964 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102542 2.673±1.27 3.947±0.86 4.925±0.32 2.321±1.07 1.326±0.38 1.542±0.68 0.793±0.00 2.047±0.52 3.060±1.47 3.031±1.30 0.957±0.26 3.793±1.02 4.044±2.30 2.295±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008IU CIL_0008IU_0002 VISTA 2:114111449-114713021
CIL_0006HH CIL_0006HH_0002 CGP 2:114193461-114654964
CIL_0007MM CIL_0007MM_0002 UCNEbase 2:114412124-116821493
CIL_0008V7 CIL_0008V7_0002 VISTA 2:114439395-115040295
CIL_0006HI CIL_0006HI_0002 CGP 2:114516416-115778768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0017178 IEA diphthine-ammonia ligase activity
GO:0017183 IEA peptidyl-diphthamide biosynthetic process from peptidyl-histidine

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256538 DPH6-001 protein_coding Homo_sapiens 0 924
ENST00000558266 DPH6-009 protein_coding Homo_sapiens 0 425
ENST00000559784 DPH6-006 processed_transcript Homo_sapiens 2.8026e-45 185
ENST00000561411 DPH6-004 protein_coding Homo_sapiens 0 658

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