C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acetyl-Coenzyme A carboxylase beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102582 Acacb-001 ENSMUSG00000042010 10090 + 5:114146535-114250761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102582
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102582 4.258±0.34 0.620±0.13 0.070±0.00 6.122±0.82 9.994±0.44 2.697±0.40 1.758±0.88 1.857±0.00 17.472±1.78 1.155±0.62 0.360±0.07 0.173±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041E CIL_00041E_0002 CGP 5:114130386-114250761
CIL_0001VV CIL_0001VV_0002 CGP 5:114146535-114273807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003989 IDA acetyl-CoA carboxylase activity
GO:0004075 IEA biotin carboxylase activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0006084 IEA acetyl-CoA metabolic process
GO:0006633 IMP fatty acid biosynthetic process
GO:0009374 IEA biotin binding
GO:0010884 IMP positive regulation of lipid storage
GO:0014070 IEA response to organic cyclic compound
GO:0042493 IEA response to drug
GO:0046322 IMP negative regulation of fatty acid oxidation
GO:0046872 IEA metal ion binding
GO:0051289 IEA protein homotetramerization
GO:0060421 IMP positive regulation of heart growth
GO:2001295 IMP malonyl-CoA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000083079 acaca-201 protein_coding Danio_rerio 0 1367
ENSDART00000146773 acaca-001 protein_coding Danio_rerio 0 1367
ENSDART00000089078 acacb-201 protein_coding Danio_rerio 0 1092
ENSDART00000148130 acacb-001 protein_coding Danio_rerio 0 1092
ENST00000338432 ACACB-001 protein_coding Homo_sapiens 0 7419
ENST00000377848 ACACB-201 protein_coding Homo_sapiens 0 7419
ENST00000377854 ACACB-202 protein_coding Homo_sapiens 0 6652
ENST00000396233 ACACB-012 retained_intron Homo_sapiens 0 292
ENST00000536440 ACACB-013 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000537347 ACACB-010 retained_intron Homo_sapiens 0 516
ENST00000538526 ACACB-004 nonsense_mediated_decay Homo_sapiens 0 2776
ENST00000544651 ACACB-008 retained_intron Homo_sapiens 0 255
ENST00000544726 ACACB-002 protein_coding Homo_sapiens 0 453
ENST00000611803 ACACA-201 protein_coding Homo_sapiens 0 861
ENST00000612895 ACACA-002 protein_coding Homo_sapiens 0 861
ENST00000613687 ACACA-202 protein_coding Homo_sapiens 0 861
ENST00000614428 ACACA-009 protein_coding Homo_sapiens 0 861
ENST00000616317 ACACA-001 protein_coding Homo_sapiens 0 861
ENST00000617649 ACACA-003 protein_coding Homo_sapiens 0 861
ENST00000619245 ACACA-023 retained_intron Homo_sapiens 0 374
ENST00000619487 ACACA-204 protein_coding Homo_sapiens 0 861
ENST00000619546 ACACA-012 protein_coding Homo_sapiens 0 455
ENST00000621312 ACACA-205 protein_coding Homo_sapiens 0 861

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