C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102849 Usp20-001 ENSMUSG00000026854 10090 + 2:30982279-31023586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102849
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102849 3.567±1.40 5.513±2.03 3.653±0.22 8.298±4.18 4.447±1.86 3.627±1.54 2.575±0.54 2.827±0.77 1.553±0.49 3.690±0.76 1.889±0.77 8.677±2.50 0.935±0.00 7.137±2.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M0 CIL_0002M0_0003 CGP 2:30972833-31023586
CIL_0006FN CIL_0006FN_0002 CGP 2:30982279-31142008

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001664 IEA G-protein coupled receptor binding
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 IEA ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006897 IEA endocytosis
GO:0008270 IEA zinc ion binding
GO:0008277 ISS regulation of G-protein coupled receptor protein signaling pathway
GO:0016579 ISS protein deubiquitination
GO:0070536 ISS protein K63-linked deubiquitination
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315480 USP20-003 protein_coding Homo_sapiens 0 3160
ENST00000358355 USP20-002 protein_coding Homo_sapiens 0 3160
ENST00000372429 USP20-001 protein_coding Homo_sapiens 0 3160
ENST00000474895 USP20-006 processed_transcript Homo_sapiens 0 846

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