C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H4f
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102971 Hist1h4f-001 ENSMUSG00000069274 10090 - 13:23551258-23551648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102971
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102971 2.441±1.87 0.785±0.51 0.246±0.13 11.812±1.25 2.578±1.30 7.922±2.80 0.345±0.11 0.907±0.39 11.891±13.20 0.742±0.19 0.149±0.00 6.039±1.64 11.905±9.83 1.773±0.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 ISS nucleosome
GO:0003677 ISS DNA binding
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0006334 ISS nucleosome assembly
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000126439 protein_coding Danio_rerio 0 316
ENSDART00000128059 protein_coding Danio_rerio 0 316
ENSDART00000112685 si:ch211-113a14.10-201 protein_coding Danio_rerio 0 289
ENST00000355057 HIST1H4J-001 protein_coding Homo_sapiens 0 409
ENST00000358064 HIST4H4-001 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000377745 HIST1H4B-001 protein_coding Homo_sapiens 0 287
ENST00000539745 HIST4H4-002 protein_coding Homo_sapiens 0 296
ENST00000578186 HIST2H4A-004 protein_coding Homo_sapiens 0 333
ENST00000579512 HIST2H4B-004 protein_coding Homo_sapiens 0 333
ENST00000611927 HIST1H4K-001 protein_coding Homo_sapiens 0 390
ENST00000612061 HIST2H4B-002 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000613412 HIST2H4A-002 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000614272 HIST2H4A-003 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000615353 HIST1H4I-001 protein_coding Homo_sapiens 0 372
ENST00000618193 HIST2H4A-001 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000618305 HIST1H4L-001 protein_coding Homo_sapiens 0 326
ENST00000621520 HIST2H4B-003 nonsense_mediated_decay Homo_sapiens 0 333

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