C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103146 Rpl23-001 ENSMUSG00000071415 10090 - 11:97777527-97782437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103146
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103146 89.309±35.06 21.344±2.07 69.939±16.23 154.837±7.50 70.500±23.58 92.925±11.82 64.179±11.32 107.327±14.75 211.056±204.06 81.096±6.50 68.396±21.41 85.682±74.17 179.136±126.77 63.598±30.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003Y CIL_00003Y_0002 CGP 11:97771481-97782437
CIL_0006QO CIL_0006QO_0002 CGP 11:97777527-97838764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 ISA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 IEA cytoplasm
GO:0005925 IEA focal adhesion
GO:0006412 ISA translation
GO:0016020 IEA membrane
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0022626 ISA cytosolic ribosome
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.00000000000006 84

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