C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytokine receptor-like factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103233 Crlf3-002 ENSMUSG00000017561 10090 - 11:80046493-80080938 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungMuscleOvaryPlacentaTestisENSMUST00000103233
Transcript ID Brain Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103233 0.576±0.00 4.841±2.49 2.204±0.00 0.330±0.04 2.139±0.58 2.783±0.00 0.870±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000141 CIL_000141_0002 CGP 11:80046493-80135794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 ISS G1/S transition of mitotic cell cycle
GO:0003674 ND molecular_function
GO:0005737 ISS cytoplasm
GO:0030308 ISS negative regulation of cell growth
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046427 ISS positive regulation of JAK-STAT cascade
GO:0071158 ISS positive regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324238 CRLF3-001 protein_coding Homo_sapiens 0 1221
ENST00000440950 AC092568.1-001 processed_pseudogene Homo_sapiens 0 821
ENST00000578692 CRLF3-002 nonsense_mediated_decay Homo_sapiens 0 771
ENST00000583805 CRLF3-004 processed_transcript Homo_sapiens 0 250

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