C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105276 Syt1-001 ENSMUSG00000035864 10090 - 10:108497650-109010975 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyTestisENSMUST00000105276
Transcript ID Kidney Testis
ENSMUST00000105276 0.415±0.22 0.072±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000884 CIL_000884_0002 VISTA 10:108287857-108889362

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 ISS SNARE binding
GO:0001786 IEA phosphatidylserine binding
GO:0005215 IEA transporter activity
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005543 IEA phospholipid binding
GO:0005544 ISS calcium-dependent phospholipid binding
GO:0005546 IEA phosphatidylinositol-4,5-bisphosphate binding
GO:0005737 IEA cytoplasm
GO:0005886 TAS plasma membrane
GO:0007269 IDA neurotransmitter secretion
GO:0008021 TAS synaptic vesicle
GO:0008022 IEA protein C-terminus binding
GO:0016021 IEA integral component of membrane
GO:0016079 IMP synaptic vesicle exocytosis
GO:0017075 ISS syntaxin-1 binding
GO:0017158 IEA regulation of calcium ion-dependent exocytosis
GO:0019905 IEA syntaxin binding
GO:0030054 IEA cell junction
GO:0030141 IDA secretory granule
GO:0030276 IEA clathrin binding
GO:0030672 IDA synaptic vesicle membrane
GO:0031045 IEA dense core granule
GO:0031201 IEA SNARE complex
GO:0031340 IEA positive regulation of vesicle fusion
GO:0042734 IDA presynaptic membrane
GO:0042802 IEA identical protein binding
GO:0043005 IDA neuron projection
GO:0043229 IEA intracellular organelle
GO:0045956 IEA positive regulation of calcium ion-dependent exocytosis
GO:0048278 IEA vesicle docking
GO:0048306 IPI calcium-dependent protein binding
GO:0048791 IDA calcium ion-dependent exocytosis of neurotransmitter
GO:0050750 ISO low-density lipoprotein particle receptor binding
GO:0050806 IMP positive regulation of synaptic transmission
GO:0051592 IEA response to calcium ion
GO:0051966 IMP regulation of synaptic transmission, glutamatergic
GO:0060076 IEA excitatory synapse
GO:1903305 ISS regulation of regulated secretory pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000041861 syt1a-001 protein_coding Danio_rerio 0 721
ENST00000261205 SYT1-001 protein_coding Homo_sapiens 0 3596
ENST00000393240 SYT1-002 protein_coding Homo_sapiens 0 2948
ENST00000457153 SYT1-004 protein_coding Homo_sapiens 0 3539
ENST00000552074 SYT1-007 protein_coding Homo_sapiens 0 357
ENST00000552744 SYT1-005 protein_coding Homo_sapiens 0 2948

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