C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptotagmin Ia
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000041861 syt1a-001 ENSDARG00000030614 7955 + 4:20141973-20248531 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENSDART00000041861
Transcript ID Heart Kidney Liver
ENSDART00000041861 1.315±0.56 0.429±0.28 0.130±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BE CIL_0002BE_0001 CGP 4:20141972-20402515

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064054 Syt1-006 protein_coding Mus_musculus 0 721
ENSMUST00000105276 Syt1-001 protein_coding Mus_musculus 0 721
ENSMUST00000121990 Syt2-001 protein_coding Mus_musculus 0 496
ENSMUST00000188842 Syt2-002 protein_coding Mus_musculus 0 496
ENST00000261205 SYT1-001 protein_coding Homo_sapiens 0 665
ENST00000393240 SYT1-002 protein_coding Homo_sapiens 0 665
ENST00000457153 SYT1-004 protein_coding Homo_sapiens 0 669
ENST00000552744 SYT1-005 protein_coding Homo_sapiens 0 665

Loading