C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenomatosis polyposis coli 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105359 Apc2-001 ENSMUSG00000020135 10090 + 10:80295977-80318263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENSMUST00000105359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENSMUST00000105359 0.774±0.23 1.117±0.39 0.848±0.00 39.915±17.31 0.703±0.06 0.799±0.02 0.611±0.22 0.388±0.05 1.063±0.35 0.122±0.00 1.150±0.28 0.842±0.62 0.258±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZF CIL_0000ZF_0002 CGP 10:80292453-80318263
CIL_0000ZG CIL_0000ZG_0002 CGP 10:80295977-80320537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008013 IEA beta-catenin binding
GO:0008017 IEA microtubule binding
GO:0016055 IEA Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233607 APC2-201 protein_coding Homo_sapiens 0 4229
ENST00000238483 APC2-006 protein_coding Homo_sapiens 0 2314
ENST00000535453 APC2-004 protein_coding Homo_sapiens 0 4231
ENST00000587149 APC2-008 protein_coding Homo_sapiens 0 431
ENST00000587869 APC2-005 protein_coding Homo_sapiens 0 593
ENST00000590469 APC2-001 protein_coding Homo_sapiens 0 2228
ENST00000590877 APC2-007 protein_coding Homo_sapiens 0 647
ENST00000593146 APC2-003 retained_intron Homo_sapiens 0 1330

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