C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ZF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115268-ENSG00000115266 CGP 9606 19:1438358-1473244
GeneTranscriptPositionBiotype
ENSG00000115266 (APC2)
adenomatosis polyposis coli 2 		ENST00000233607 (APC2-201) 1450149-1473244 protein_coding
ENST00000238483 (APC2-006) 1452800-1465496 protein_coding
ENST00000535453 (APC2-004) 1451289-1473244 protein_coding
ENST00000587149 (APC2-008) 1452198-1453614 protein_coding
ENST00000587869 (APC2-005) 1446302-1455245 protein_coding
ENST00000590469 (APC2-001) 1450149-1465409 protein_coding
ENST00000590877 (APC2-007) 1450149-1455445 protein_coding
ENST00000593146 (APC2-003) 1450295-1465418 retained_intron
ENSG00000115268 (RPS15)
ribosomal protein S15 		ENST00000233609 (RPS15-006) 1438358-1440494 protein_coding
ENST00000585665 (RPS15-010) 1438422-1440494 protein_coding
ENST00000586096 (RPS15-011) 1438421-1440494 protein_coding
ENST00000586656 (RPS15-005) 1438405-1440233 protein_coding
ENST00000586686 (RPS15-009) 1438385-1440494 protein_coding
ENST00000589656 (RPS15-004) 1438405-1440488 protein_coding
ENST00000591032 (RPS15-008) 1438400-1440490 protein_coding
ENST00000591804 (RPS15-013) 1438406-1440494 protein_coding
ENST00000592588 (RPS15-001) 1438386-1440494 protein_coding
ENST00000592623 (RPS15-012) 1438401-1440494 protein_coding
ENST00000592700 (RPS15-003) 1438420-1440494 retained_intron
ENST00000593052 (RPS15-002) 1438419-1440494 protein_coding
ENST00000617694 (RPS15-007) 1438422-1440049 protein_coding
ENSG00000267317 (CTB-25B13.12)
 ENST00000591252 (CTB-25B13.12-002) 1457670-1458580 antisense
ENSG00000268798 (CTB-25B13.5)
 ENST00000594262 (CTB-25B13.5-001) 1440839-1441938 lincRNA
CIL_0000ZF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063457-ENSMUSG00000020135 CGP 10090 10:80292453-80318263
GeneTranscriptPositionBiotype
ENSMUSG00000020133 (2310011J03Rik)
RIKEN cDNA 2310011J03 gene 		ENSMUST00000020341 (2310011J03Rik-001) 80318254-80320537 protein_coding
ENSMUSG00000020135 (Apc2)
adenomatosis polyposis coli 2 		ENSMUST00000020349 (Apc2-201) 80301820-80318256 protein_coding
ENSMUST00000105359 (Apc2-001) 80295977-80318263 protein_coding
ENSMUST00000138909 (Apc2-004) 80301035-80302406 protein_coding
ENSMUST00000140658 (Apc2-005) 80300847-80303355 retained_intron
ENSMUST00000140828 (Apc2-003) 80301034-80302347 protein_coding
ENSMUST00000154212 (Apc2-002) 80299091-80302361 protein_coding
ENSMUSG00000063457 (Rps15)
ribosomal protein S15 		ENSMUST00000062674 (Rps15-002) 80292645-80294087 protein_coding
ENSMUST00000068408 (Rps15-001) 80292453-80294114 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZF_0001ENSG00000115266ENST00000233607ENST00000238483ENST00000535453ENST00000587149ENST00000587869ENST00000590469ENST00000590877ENST00000593146ENSG00000115268ENST00000233609ENST00000585665ENST00000586096ENST00000586656ENST00000586686ENST00000589656ENST00000591032ENST00000591804ENST00000592588ENST00000592623ENST00000592700ENST00000593052ENST00000617694ENSG00000267317ENST00000591252ENSG00000268798ENST00000594262CIL_0000ZF_0002ENSMUSG00000020133ENSMUST00000020341ENSMUSG00000020135ENSMUST00000020349ENSMUST00000105359ENSMUST00000138909ENSMUST00000140658ENSMUST00000140828ENSMUST00000154212ENSMUSG00000063457ENSMUST00000062674ENSMUST00000068408
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZF_0001ENSG00000115266ENST00000233607ENSG00000115268ENST00000233609ENST00000585665ENST00000589656ENST00000592588ENST00000592623ENSG00000267317ENST00000591252ENSG00000268798ENST00000594262CIL_0000ZF_0002ENSMUSG00000020133ENSMUST00000020341ENSMUSG00000020135ENSMUST00000020349ENSMUST00000105359ENSMUSG00000063457ENSMUST00000062674ENSMUST00000068408
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115266 ENST00000233607 N/A N/A 0.034±0.00 8.983±0.00 N/A 0.413±0.35 0.029±0.00 N/A N/A 0.070±0.00 N/A N/A N/A N/A
ENST00000238483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000115268 ENST00000233609 N/A N/A 2.871±0.00 20.157±1.72 37.833±0.00 74.317±0.00 2.546±0.00 N/A 9.241±0.00 N/A N/A 141.394±120.96 168.407±22.25 32.994±16.98
ENST00000585665 107.725±0.00 150.563±0.00 N/A 71.626±0.00 92.907±0.00 232.863±0.00 92.027±0.00 165.012±0.00 63.798±0.00 352.545±0.00 313.919±0.00 N/A N/A 99.449±0.00
ENST00000586096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589656 N/A N/A N/A 92.014±0.00 116.218±0.00 280.809±0.00 N/A 145.538±0.00 N/A N/A N/A 42.079±0.00 97.714±0.00 129.650±0.00
ENST00000591032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592588 289.138±0.00 463.538±0.00 11.938±0.00 117.915±0.00 92.571±22.50 66.186±0.00 43.903±27.30 71.136±0.00 70.968±34.12 228.480±192.79 205.335±52.12 385.276±411.43 641.171±392.58 81.273±8.35
ENST00000592623 N/A N/A 1.117±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267317 ENST00000591252 5.540±0.00 N/A 0.269±0.00 N/A 3.592±2.03 2.760±0.82 1.268±0.97 1.266±0.00 3.629±1.31 2.982±0.00 0.893±0.37 3.330±3.09 N/A N/A
ENSG00000268798 ENST00000594262 0.072±0.00 0.317±0.00 N/A 0.264±0.22 0.201±0.00 0.292±0.00 N/A 0.213±0.00 0.033±0.00 0.370±0.25 0.179±0.00 0.276±0.10 0.244±0.10 0.258±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020133 ENSMUST00000020341 28.404±6.00 27.460±0.94 22.923±2.23 N/A 20.532±9.32 28.711±2.79 9.805±1.33 20.829±1.41 17.200±7.74 26.401±1.21 4.840±0.84 27.647±10.18 17.512±4.82 4.539±2.03
ENSMUSG00000020135 ENSMUST00000020349 N/A 0.837±0.00 N/A N/A N/A 0.784±0.05 0.381±0.00 N/A N/A N/A 0.114±0.01 1.177±0.50 0.583±0.00 0.325±0.23
ENSMUST00000105359 0.774±0.23 1.117±0.39 0.848±0.00 39.915±17.31 0.703±0.06 0.799±0.02 0.611±0.22 0.388±0.05 N/A 1.063±0.35 0.122±0.00 1.150±0.28 0.842±0.62 0.258±0.00
ENSMUST00000138909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063457 ENSMUST00000062674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.446±0.00
ENSMUST00000068408 571.990±122.70 593.339±12.19 1469.995±164.70 648.127±366.21 634.369±220.76 978.184±261.99 403.886±102.84 726.336±96.68 1100.259±750.08 669.021±61.28 429.057±44.86 929.059±310.86 955.375±517.64 318.677±147.74

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