C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000ZG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115266-ENSG00000119559 CGP 9606 19:1446302-1479556
GeneTranscriptPositionBiotype
ENSG00000115266 (APC2)
adenomatosis polyposis coli 2
ENST00000233607 (APC2-201) 1450149-1473244 protein_coding
ENST00000238483 (APC2-006) 1452800-1465496 protein_coding
ENST00000535453 (APC2-004) 1451289-1473244 protein_coding
ENST00000587149 (APC2-008) 1452198-1453614 protein_coding
ENST00000587869 (APC2-005) 1446302-1455245 protein_coding
ENST00000590469 (APC2-001) 1450149-1465409 protein_coding
ENST00000590877 (APC2-007) 1450149-1455445 protein_coding
ENST00000593146 (APC2-003) 1450295-1465418 retained_intron
ENSG00000267317 (CTB-25B13.12)
ENST00000591252 (CTB-25B13.12-002) 1457670-1458580 antisense
CIL_0000ZG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020135-ENSMUSG00000020133 CGP 10090 10:80295977-80320537
GeneTranscriptPositionBiotype
ENSMUSG00000020133 (2310011J03Rik)
RIKEN cDNA 2310011J03 gene
ENSMUST00000020341 (2310011J03Rik-001) 80318254-80320537 protein_coding
ENSMUSG00000020135 (Apc2)
adenomatosis polyposis coli 2
ENSMUST00000020349 (Apc2-201) 80301820-80318256 protein_coding
ENSMUST00000105359 (Apc2-001) 80295977-80318263 protein_coding
ENSMUST00000138909 (Apc2-004) 80301035-80302406 protein_coding
ENSMUST00000140658 (Apc2-005) 80300847-80303355 retained_intron
ENSMUST00000140828 (Apc2-003) 80301034-80302347 protein_coding
ENSMUST00000154212 (Apc2-002) 80299091-80302361 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZG_0001ENSG00000115266ENST00000233607ENST00000238483ENST00000535453ENST00000587149ENST00000587869ENST00000590469ENST00000590877ENST00000593146ENSG00000267317ENST00000591252CIL_0000ZG_0002ENSMUSG00000020133ENSMUST00000020341ENSMUSG00000020135ENSMUST00000020349ENSMUST00000105359ENSMUST00000138909ENSMUST00000140658ENSMUST00000140828ENSMUST00000154212
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ZG_0001ENSG00000115266ENST00000233607ENSG00000267317ENST00000591252CIL_0000ZG_0002ENSMUSG00000020133ENSMUST00000020341ENSMUSG00000020135ENSMUST00000020349ENSMUST00000105359
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115266 ENST00000233607 N/A N/A 0.034±0.00 8.983±0.00 N/A 0.413±0.35 0.029±0.00 N/A N/A 0.070±0.00 N/A N/A N/A N/A
ENST00000238483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267317 ENST00000591252 5.540±0.00 N/A 0.269±0.00 N/A 3.592±2.03 2.760±0.82 1.268±0.97 1.266±0.00 3.629±1.31 2.982±0.00 0.893±0.37 3.330±3.09 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020133 ENSMUST00000020341 28.404±6.00 27.460±0.94 22.923±2.23 N/A 20.532±9.32 28.711±2.79 9.805±1.33 20.829±1.41 17.200±7.74 26.401±1.21 4.840±0.84 27.647±10.18 17.512±4.82 4.539±2.03
ENSMUSG00000020135 ENSMUST00000020349 N/A 0.837±0.00 N/A N/A N/A 0.784±0.05 0.381±0.00 N/A N/A N/A 0.114±0.01 1.177±0.50 0.583±0.00 0.325±0.23
ENSMUST00000105359 0.774±0.23 1.117±0.39 0.848±0.00 39.915±17.31 0.703±0.06 0.799±0.02 0.611±0.22 0.388±0.05 N/A 1.063±0.35 0.122±0.00 1.150±0.28 0.842±0.62 0.258±0.00
ENSMUST00000138909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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