C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(rC) binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105411 Pcbp3-001 ENSMUSG00000001120 10090 - 10:76761860-76961887 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105411
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105411 2.706±0.92 2.416±0.17 2.692±0.29 0.567±0.03 0.694±0.14 0.256±0.05 1.630±0.00 0.078±0.06 1.840±0.22 0.120±0.01 1.210±0.76 0.622±0.23 17.664±1.40

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000048893 pcbp3-201 protein_coding Danio_rerio 0 782
ENSDART00000134431 pcbp3-003 protein_coding Danio_rerio 0 640
ENSDART00000148317 pcbp3-004 protein_coding Danio_rerio 0 640
ENSDART00000015267 pcbp3-001 protein_coding Danio_rerio 0 640
ENSDART00000025885 pcbp2-001 protein_coding Danio_rerio 0 473
ENSDART00000144448 pcbp3-005 nonsense_mediated_decay Danio_rerio 0 401
ENSDART00000131317 pcbp2-004 protein_coding Danio_rerio 0 331
ENST00000400304 PCBP3-003 protein_coding Homo_sapiens 0 828
ENST00000400305 PCBP3-009 protein_coding Homo_sapiens 0 693
ENST00000400308 PCBP3-005 protein_coding Homo_sapiens 0 822
ENST00000400309 PCBP3-004 protein_coding Homo_sapiens 0 1663
ENST00000400310 PCBP3-002 protein_coding Homo_sapiens 0 1149
ENST00000400314 PCBP3-001 protein_coding Homo_sapiens 0 1650
ENST00000449640 PCBP3-201 protein_coding Homo_sapiens 0 963
ENST00000465077 PCBP3-006 processed_transcript Homo_sapiens 1e-21 108
ENST00000468429 PCBP3-010 processed_transcript Homo_sapiens 0 1238
ENST00000475402 PCBP3-011 processed_transcript Homo_sapiens 0 396
ENST00000498121 PCBP3-008 retained_intron Homo_sapiens 0 440

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