C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HGF-regulated tyrosine kinase substrate
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106205 Hgs-001 ENSMUSG00000025793 10090 + 11:120467635-120483979 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106205
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106205 8.164±2.11 13.157±1.48 2.911±0.00 9.699±2.00 8.028±2.05 11.938±3.87 4.089±0.12 8.900±1.11 5.523±2.19 9.229±1.19 2.827±0.27 10.966±2.58 8.011±2.45 28.776±9.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BA CIL_0003BA_0002 CGP 11:120464866-120483984
CIL_0004BU CIL_0004BU_0002 CGP 11:120467635-120489065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000019661 hgs-201 protein_coding Danio_rerio 0 680
ENSDART00000131913 hgs-001 protein_coding Danio_rerio 0 680
ENSDART00000056622 hgs-202 protein_coding Danio_rerio 0 514
ENST00000329138 HGS-001 protein_coding Homo_sapiens 0 2643
ENST00000571237 HGS-013 protein_coding Homo_sapiens 0 621
ENST00000571518 HGS-003 protein_coding Homo_sapiens 0 444
ENST00000572392 HGS-008 protein_coding Homo_sapiens 0 603
ENST00000573080 HGS-007 retained_intron Homo_sapiens 1.99965e-42 178
ENST00000576087 HGS-010 retained_intron Homo_sapiens 0 496
ENST00000576393 HGS-009 retained_intron Homo_sapiens 0 662
ENST00000576498 HGS-004 retained_intron Homo_sapiens 0 911
ENST00000577012 HGS-011 protein_coding Homo_sapiens 0 496

Loading