C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 65
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106440 Trim65-003 ENSMUSG00000054517 10090 - 11:116121846-116131124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106440 3.302±0.53 3.873±0.52 3.512±0.88 0.659±0.44 5.207±1.27 3.703±0.25 1.626±0.51 2.578±0.48 1.308±0.55 5.082±0.00 0.961±0.27 3.554±1.38 0.637±0.06 0.209±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00078U CIL_00078U_0002 CGP 11:116078573-116127210
CIL_00078V CIL_00078V_0002 CGP 11:116105752-116131128
CIL_0003KG CIL_0003KG_0003 CGP 11:116121846-116138868

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269383 TRIM65-001 protein_coding Homo_sapiens 0 529
ENST00000591668 TRIM65-007 protein_coding Homo_sapiens 0 195

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