C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mesoderm induction early response 1 homolog (Xenopus laevis
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106855 Mier1-003 ENSMUSG00000028522 10090 + 4:103143057-103162754 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000106855
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000106855 24.672±0.00 53.587±31.56 64.284±5.29 83.589±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000260 CIL_000260_0002 CGP 4:103017872-103114555
CIL_000261 CIL_000261_0002 CGP 4:103038065-103165754
CIL_00069G CIL_00069G_0002 CGP 4:103114390-103215164

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0006351 IEA transcription, DNA-templated
GO:0017053 ISS transcriptional repressor complex
GO:0031937 ISS positive regulation of chromatin silencing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355356 MIER1-002 protein_coding Homo_sapiens 0 1308
ENST00000355977 MIER1-201 protein_coding Homo_sapiens 0 891
ENST00000357692 MIER1-001 protein_coding Homo_sapiens 0 1308
ENST00000371014 MIER1-008 protein_coding Homo_sapiens 0 891
ENST00000371016 MIER1-006 protein_coding Homo_sapiens 0 891
ENST00000371018 MIER1-202 protein_coding Homo_sapiens 0 974
ENST00000401041 MIER1-009 protein_coding Homo_sapiens 0 1308
ENST00000401042 MIER1-007 protein_coding Homo_sapiens 0 891

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