C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: remodeling and spacing factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107153 Rsf1-001 ENSMUSG00000035623 10090 + 7:97579897-97692778 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000107153
Transcript ID Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000107153 1.503±0.48 2.440±0.73 0.423±0.00 0.450±0.04 0.658±0.00 1.293±0.30 0.666±0.25 4.097±1.27 1.199±0.37 0.681±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding
GO:0031213 IEA RSF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308488 RSF1-001 protein_coding Homo_sapiens 0 5784
ENST00000440064 RSF1-004 protein_coding Homo_sapiens 0 510
ENST00000467567 RSF1-002 retained_intron Homo_sapiens 0 424
ENST00000480887 RSF1-003 protein_coding Homo_sapiens 0 4364
ENST00000526324 RSF1-006 protein_coding Homo_sapiens 0 1989
ENST00000528095 RSF1-005 protein_coding Homo_sapiens 0 1925
ENST00000530604 RSF1-008 processed_transcript Homo_sapiens 0 276
ENST00000531026 RSF1-007 protein_coding Homo_sapiens 0 1157
ENST00000531768 RSF1-011 retained_intron Homo_sapiens 0 542
ENST00000532556 RSF1-010 protein_coding Homo_sapiens 0 451
ENST00000534794 RSF1-009 processed_transcript Homo_sapiens 0 610

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