C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: catenin (cadherin associated protein), alpha-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107612 Ctnnal1-005 ENSMUSG00000038816 10090 - 4:56840746-56865154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverENSMUST00000107612
Transcript ID Adrenal Liver
ENSMUST00000107612 9.606±7.29 0.557±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000226 CIL_000226_0003 CGP 4:56802345-56865188
CIL_0001GL CIL_0001GL_0002 CGP 4:56810935-56947437

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton
GO:0045296 IEA cadherin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325551 CTNNAL1-001 protein_coding Homo_sapiens 0 599
ENST00000374593 CTNNAL1-005 protein_coding Homo_sapiens 0 472
ENST00000374595 CTNNAL1-002 protein_coding Homo_sapiens 0 599

Loading