C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trans-acting transcription factor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107622 Sp6-002 ENSMUSG00000038560 10090 + 11:97018733-97024731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungENSMUST00000107622
Transcript ID Adrenal Breast Colon Kidney Liver Lung
ENSMUST00000107622 0.015±0.00 0.147±0.01 0.018±0.00 0.087±0.00 0.008±0.00 0.231±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0005634 IDA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 ISS transcription from RNA polymerase II promoter
GO:0008284 IDA positive regulation of cell proliferation
GO:0042481 IMP regulation of odontogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342234 SP6-001 protein_coding Homo_sapiens 0 1580
ENST00000361443 SP8-002 protein_coding Homo_sapiens 0 246
ENST00000418710 SP8-001 protein_coding Homo_sapiens 0 246
ENST00000536300 SP6-002 protein_coding Homo_sapiens 0 1705
ENST00000617581 SP8-201 protein_coding Homo_sapiens 0 246

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