C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sp8 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617581 SP8-201 ENSG00000164651 9606 - 7:20782283-20786886 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENST00000617581
Transcript ID Brain Placenta Testis
ENST00000617581 0.317±0.00 0.059±0.03 0.156±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UH CIL_0007UH_0001 VISTA 7:20489771-21090788
CIL_0007YM CIL_0007YM_0001 VISTA 7:20493009-21094283
CIL_0007Z1 CIL_0007Z1_0001 VISTA 7:20499224-21100776
CIL_0007QC CIL_0007QC_0001 VISTA 7:20658049-21259483
CIL_0008NJ CIL_0008NJ_0001 VISTA 7:20663661-21265131
CIL_0008EN CIL_0008EN_0001 VISTA 7:20679932-21281581
CIL_0008JT CIL_0008JT_0001 VISTA 7:20741182-21342467
CIL_0007T9 CIL_0007T9_0001 VISTA 7:20744723-21345841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063918 Sp8-201 protein_coding Mus_musculus 0 1203
ENSMUST00000090813 Sp9-001 protein_coding Mus_musculus 0 520
ENSMUST00000100043 Sp5-001 protein_coding Mus_musculus 0 322
ENSMUST00000107622 Sp6-002 protein_coding Mus_musculus 0 246
ENSMUST00000047997 Sp6-001 protein_coding Mus_musculus 0 246

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